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Evo‐Scope : Fully automated assessment of correlated evolution on phylogenetic trees

Maxime Godfroid , Charles Coluzzi , Amaury Lambert , Philippe Glaser , Eduardo P C Rocha , et al.
Methods in Ecology and Evolution, 2024, 15 (2), pp.282 - 289. ⟨10.1111/2041-210x.14190⟩
Article dans une revue pasteur-04778723v1
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1926–2016: 90 Years of listeriology

Alice Lebreton , Fabrizia Stavru , Sylvain Brisse , Pascale Cossart
Microbes and Infection, 2016, 18 (12), pp.711 - 723. ⟨10.1016/j.micinf.2016.10.009⟩
Article dans une revue hal-01400517v2
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“Epidemic Clones” of Listeria monocytogenes Are Widespread and Ancient Clonal Groups

Thomas Cantinelli , Viviane Chenal-Francisque , Laure Diancourt , Lise Frezal , Alexandre Leclercq , et al.
Journal of Clinical Microbiology, 2013, 51 (11), pp.3770-3779. ⟨10.1128/JCM.01874-13⟩
Article dans une revue pasteur-02869829v1

Testing for independence between evolutionary processes

Abdelkader Behdenna , Joël Pothier , Sophie S. Abby , Guillaume Achaz , Amaury Lambert
Systematic Biology, 2016, 65 (5), pp.812-823. ⟨10.1093/sysbio/syw004⟩
Article dans une revue hal-01490961v1
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The Impact of Selection, Gene Conversion, and Biased Sampling on the Assessment of Microbial Demography

Marguerite Lapierre , Camille Blin , Amaury Lambert , Guillaume Achaz , Eduardo P C Rocha
Molecular Biology and Evolution, 2016, 33, pp.1711 - 1725. ⟨10.1093/molbev/msw048⟩
Article dans une revue pasteur-01374966v1
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Phage-host coevolution in natural populations

Damien Piel , Maxime Bruto , Yannick Labreuche , François Blanquart , David Goudenège , et al.
Nature Microbiology, 2022, 7 (7), pp.1075-1086. ⟨10.1038/s41564-022-01157-1⟩
Article dans une revue hal-03738913v2
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Intracellular Positioning Systems Limit the Entropic Eviction of Secondary Replicons Toward the Nucleoid Edges in Bacterial Cells

Julie Dauverd -Girault , Charlène Planchenault , Marine C Pons , Caroline Schiavon , Patricia Siguier , et al.
Journal of Molecular Biology, 2020, 432 (3), pp.745-761. ⟨10.1016/j.jmb.2019.11.027⟩
Article dans une revue hal-02392007v1
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Chance Favors the Prepared Genomes: Horizontal Transfer Shapes the Emergence of Antibiotic Resistance Mutations in Core Genes

Charles Coluzzi , Martin Guillemet , Fanny Mazzamurro , Marie Touchon , Maxime Godfroid , et al.
Molecular Biology and Evolution, 2023, 40 (10), pp.msad217. ⟨10.1093/molbev/msad217⟩
Article dans une revue hal-04281854v1